增施氮肥能够缓解麦田土壤线虫群落对O3浓度升高的响应

在辽宁沈阳农田生态系统国家野外科学观测研究站,利用运行2a的开顶式气室,研究了臭氧(O3)浓度升高和不同氮肥施用水平对土壤线虫群落的影响。结果表明:(1)O3浓度升高降低了成熟期小麦根生物量。O3浓度升高和不同氮肥施用水平的交互作用改变了小麦成熟期土壤微生物生物量碳、氮和水溶性有机碳的含量。低氮条件下,O3浓度升高降低了土壤微生物生物量碳、氮和水溶性有机碳的含量;而高氮条件下则表现出相反的趋势。(2)O3浓度升高和不同氮肥施用水平对土壤线虫总数没有产生显著影响,而在灌浆期,食细菌线虫和食真菌线虫中c-p值为4(Ba4 and Fu4)的功能团对O3浓度升高和不同氮肥施用水平的响应敏感;与对照相比,不同氮处理中,O3浓度升高均降低了灌浆期Ba4功能团线虫的数量。灌浆期,O3浓度升高条件下,与对照相比Fu4功能团线虫数量在高氮条件下表现出增加的趋势,而在低氮条件表现出降低的趋势。(3)O3浓度升高和不同氮肥施用水平的交互作用显著影响了小麦灌浆期线虫的成熟度指数(MI)和结构指数(SI)。与对照相比,线虫成熟度指数和结构指数在低氮条件下随O3浓度升高而降低;而在高氮条件下随O3浓度升高而升高。上述结果表明,氮肥的施用能够缓解O3浓度升高对土壤食物网的扰动。     

A Novel A3 Group Aconitase Tolerates Oxidation and Nitric Oxide

Achromobacter denitrificans YD35 is an NO₂⁻-tolerant bacterium that expresses the aconitase genes acnA3, acnA4, and acnB, of which acnA3 is essential for growth tolerance against 100 mm NO₂⁻. Atmospheric oxygen inactivated AcnA3 at a rate of 1.6 × 10⁻³ min⁻¹, which was 2.7- and 37-fold lower compared with AcnA4 and AcnB, respectively. Stoichiometric titration showed that the [4Fe-4S]²⁺ cluster of AcnA3 was more stable against oxidative inactivation by ferricyanide than that of AcnA4. Aconitase activity of AcnA3 persisted against high NO₂⁻ levels that generate reactive nitrogen species with an inactivation rate constant of k = 7.8 × 10⁻³ min⁻¹, which was 1.6- and 7.8-fold lower than those for AcnA4 and AcnB, respectively. When exposed to NO₂⁻, the acnA3 mutant (AcnA3Tn) accumulated higher levels of cellular citrate compared with the other aconitase mutants, indicating that AcnA3 is a major producer of cellular aconitase activity. The extreme resistance of AcnA3 against oxidation and reactive nitrogen species apparently contributes to bacterial NO₂⁻ tolerance. AcnA3Tn accumulated less cellular NADH and ATP compared with YD35 under our culture conditions. The accumulation of more NO by AcnA3Tn suggested that NADH-dependent enzymes detoxify NO for survival in a high NO₂⁻ milieu. This novel aconitase is distributed in Alcaligenaceae bacteria, including pathogens and denitrifiers, and it appears to contribute to a novel NO₂⁻ tolerance mechanism in this strain.     

Gefitinib-mediated Reactive Oxygen Specie (ROS) Instigates Mitochondrial Dysfunction and Drug Resistance in Lung Cancer Cells

Therapeutic benefits offered by tyrosine kinase inhibitors (TKIs), such as gefitinib (Iressa) and erlotinib (Tarceva), are limited due to the development of resistance, which contributes to treatment failure and cancer-related mortality. The aim of this study was to elucidate mechanistic insight into cellular perturbations that accompany acquired gefitinib resistance in lung cancer cells. Several lung adenocarcinoma (LAD) cell lines were screened to characterize epidermal growth factor receptor (EGFR) expression and mutation profile. To circumvent intrinsic variations between cell lines with respect to response to drug treatments, we generated gefitinib-resistant H1650 clone by long-term, chronic culture under gefitinib selection of parental cell line. Isogenic cells were analyzed by microarray, Western blot, flow cytometry, and confocal and transmission electron microscope. We observed that although chronic gefitinib treatment provided effective action against its primary target (aberrant EGFR activity), secondary effects resulted in increased cellular reactive oxygen species (ROS). Gefitinib-mediated ROS correlated with epithelial-mesenchymal transition, as well as striking perturbation of mitochondrial morphology and function. However, gefitinib treatment in the presence of ROS scavenger provided a partial rescue of mitochondrial aberrations. Furthermore, withdrawal of gefitinib from previously resistant clones correlated with normalized expression of epithelial-mesenchymal transition genes. These findings demonstrate that chronic gefitinib treatment promotes ROS and mitochondrial dysfunction in lung cancer cells. Antioxidants may alleviate ROS-mediated resistance.     

氨氧化古菌及其对氮循环贡献的研究进展

硝化作用先将氨氮氧化为亚硝酸盐氮并进一步氧化为硝酸盐氮,这一过程是氮进行全球生物化学循环的重要环节。随着氨氧化古菌(Ammonia-oxidizing archaea,AOA)基因组序列中氨单加氧酶编码基因(amoA)的发现以及AOA在实验室条件下的成功培养(包括分离纯化和富集培养),基于分子生物学的研究表明AOA在各种环境广泛存在,且多数生境中它的数量远远超过氨氧化细菌(Ammonia-oxidizing bacteria,AOB)。AOA相对于AOB在氮循环中的贡献也引起了多方面的论证和争论。本文就氨氧化古菌的生态分布、系统进化、生境存在丰度及参与硝化作用等进行综述,指出不同生境AOA的活性及其对氮循环的重要性仍需做进一步的研究。     

Plackett-Burman Design与均匀设计法优化玫瑰色微球菌固定化脱氮的性能

【目的】采用Plackett-Burman Design (PBD)与均匀设计(Uniform Design, UD) 优化玫瑰色微球菌(Micrococcus roseus)固定化脱氮的条件,以提高其脱氮性能。【方法】选择聚乙烯醇(Polyvinyl alcohol,PVA)与海藻酸钠(Sodium alginate,SA)作为固定化细胞材料,研究其成球方式与性能,应用PBD对9个影响脱氮效果的因素进行显著性检验,筛选出PVA、SA、温度、菌液接种量、菌球量5个显著性因素(P<0.05)。采用UD对5个显著因素进行条件优化,优化数据通过Minitab与Matlab软件进行逐步回归分析,并建立二阶多项式模型。【结果】最优脱氮条件为PVA 9.6%、SA 2.2%、温度33.4 °C、菌液接种量8%、菌球量500个/100 mL,连续脱氮72 h,最高脱氮率达到60.9%。【结论】PBD与UD的联合使用能够在显著因子筛选与寻优中发挥重要的作用。连续脱氮试验表明,玫瑰色微球菌去除氨氮主要通过同化、硝化与反硝化途径。     

Synthesis of Indoxyl-glycosides for Detection of Glycosidase Activities

Indoxyl glycosides proved to be valuable and versatile tools for monitoring glycosidase activities. Indoxyls are released by enzymatic hydrolysis and are rapidly oxidized, for example by atmospheric oxygen, to indigo type dyes. This reaction enables fast and easy screening in vivo without isolation or purification of enzymes, as well as rapid tests on agar plates or in solution (e.g., blue-white screening, micro-wells) and is used in biochemistry, histochemistry, bacteriology and molecular biology. Unfortunately the synthesis of such substrates proved to be difficult, due to various side reactions and the low reactivity of the indoxyl hydroxyl function. Especially for glucose type structures low yields were observed. Our novel approach employs indoxylic acid ester as key intermediates. Indoxylic acid esters with varied substitution patterns were prepared on scalable pathways. Phase transfer glycosylations with those acceptors and peracetylated glycosyl halides can be performed under common conditions in high yields. Ester cleavage and subsequent mild silver mediated glycosylation yields the peracetylated indoxyl glycosides in high yields. Finally deprotection is performed according to Zemplén.     

Nitrogen fixation by hydrogen-utilizing bacteria

Seventeen strains of nitrogen-fixing bacteria, isolated from different habitats on hydrogen and carbon dioxide as well as on other substrates, morphologically resembled each other. All strains, including Mycobacterium flavum 301, grew autotrophically with hydrogen. The isolate strain 6 was sensitive to oxygen when dependent on N₂ as nitrogen source, a consequence of the sensitivity of its nitrogenase towards oxygen. At the same time, strain 6 was sensitive to hydrogen when growing autotrophically on N₂ as nitrogen source, but hydrogen did not affect acetylene reduction by these cells.Abbreviations MPN Most probable number - BS medium basal salts medium     

Aluminium Stress Affects Nitrogen Fixation and Assimilation in Soybean (Glycine max L.)

Nitrogen fixation and assimilation in nodules and roots were studied in soybean (Glycine max L.) exposed to different levels of aluminium (Al) stress (0, 50, 200 and 500 μM). Al at 500 μM induced oxidative stress, which became evident from an increase in lipid peroxidation accompanied by a concomitant decline in antioxidant enzyme activities and leghaemoglobin breakdown. Consequently, there was also a reduction in nitrogenase activity. However, the leghaemoglobin levels and nitrogenase activity were unexpectedly found to be higher in nodules when the plants were treated with 200 μM Al. Of the enzymes involved in nitrogen assimilation, the activity of glutamate dehydrogenase-NADH was reduced in nodules under Al stress, but it was significantly higher in roots at 500 μM Al as compared to that in the control. In nodules, the glutamine synthetase/glutamate synthase-NADH pathway, assayed in terms of activity and expression of both the enzymes, was inhibited at >50 μM Al; but in roots this inhibitory effect was apparent only at 500 μM Al. No significant changes in ammonium and protein contents were recorded in the nodules or roots when the plants were treated with 50 μM Al. However, Al at ≥200 μM significantly increased the ammonium levels and decreased the protein content in the nodules. But these contrasting effects on ammonium and protein contents due to Al stress were observed in the roots only at 500 μM Al. The results suggest that the effect of Al stress on nitrogen assimilation is more conspicuous in nodules than that in the roots of soybean plants.